Image Analysis


Image Analysis is a way of extracting scientifically relevant data from images acquired by microscopy or other imaging techniques. The Biooptics Facility provides users with different solutions for answering their scientific questions. We write code for automated analysis, give trainings on imaging software as well as regular courses on using ImageJ/Fiji. For discussing analysis topics please contact image.analysis(at) Analysis goals and a possible timeframe are best discussed personally.





Visualization, manual segmentation and assignment in 3D.



3D reconstruction of lightsheet and other large datasets.



Free and versatile software for manual or automated analysis.





Visualization and analysis of 3D datasets.






For writing Macros and specific tasks.