Image Analysis

 

Image Analysis is a way of extracting scientifically relevant data from images acquired by microscopy or other imaging techniques. The Biooptics Facility provides users with different solutions for answering their scientific questions. We write code for automated analysis, give trainings on imaging software as well as regular courses on using ImageJ/Fiji. For discussing analysis topics please contact image.analysis(at)imp.ac.at. Analysis goals and a possible timeframe are best discussed personally.

 

 

Amira

 

Visualization, manual segmentation and assignment in 3D.

Arivis

 

3D reconstruction of lightsheet and other large datasets.

Definiens

 

Tissue Studio

User driven analysis of histological sections.

 

Developer

Highly flexible tool for automated image analysis.

ImageJ/Fiji

 

Free and versatile software for manual or automated analyses.

 

 

Imaris

 

Visualization and analysis of 3D datasets.

 

 

 

MetaMorph

 

For writing Macros and specific tasks.